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Sample GSM114293 Query DataSets for GSM114293
Status Public on Jul 04, 2008
Title Pineal Culture DD CT18 Replicate 5
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 18 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture DD CT18 Replicate 5
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 13, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.431849638684903
2 -0.323210878422357
3 0.0696254980032589
4 -0.234344043293253
5 0.301104832783888
6 -0.945928369723144
7 -0.407122175285945
8 -0.268781891453482
9 -0.351692192773211
10 -0.622142305177667
11 -0.14826563903333
12 -0.469937439436329
13 -0.0593666384094631
14 0.374687636924518
15 0.282711238301173
16 0.110329370427105
17 -0.46723929354474
18 0.0338131377672869
19 -0.00748131538195097
20 0.142883066595641

Total number of rows: 8084

Table truncated, full table size 184 Kbytes.




Supplementary data files not provided

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