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Sample GSM114471 Query DataSets for GSM114471
Status Public on Jul 04, 2008
Title Pineal Culture DD CT2 Replicate 1
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 2 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture DD CT2 Replicate 1
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 14, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 0.40483344198245
2 -0.16797768377682
3 -0.822161635638152
4 -0.48106337943702
5 -0.422501761240222
6 -0.0524712510640728
7 0.030979055340395
8 0.1429349898877
9 -0.192745053172276
10 -0.0386461342553562
11 -0.638378163500689
12 -1.18126818274104
13 0.0170270141375229
14 null
15 0.0950315046143646
16 -0.0130301245528238
17 -0.414222340985865
18 -4.60517018598809
19 -0.443054427108826
20 -4.60517018598809

Total number of rows: 8084

Table truncated, full table size 181 Kbytes.




Supplementary data files not provided

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