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Sample GSM114482 Query DataSets for GSM114482
Status Public on Jul 04, 2008
Title Pineal Culture DD CT2 Replicate 6
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 2 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture DD CT2 Replicate 6
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 14, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -1.34968112139579
2 -1.02438840680361
3 0.0196719324814746
4 0.0851344917419465
5 -0.2801829281217
6 -0.46385679976973
7 0.0483389195167329
8 -0.541071400420432
9 0.515244287078596
10 -0.318027540700574
11 -0.388247038493836
12 -0.173714900544545
13 -0.514139943393837
14 1.11220502082061
15 0.527215256947579
16 0.168918299780032
17 -0.796129481967994
18 -0.27249347211816
19 0.105754538020818
20 -0.387557849418183

Total number of rows: 8084

Table truncated, full table size 183 Kbytes.




Supplementary data files not provided

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