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Sample GSM114775 Query DataSets for GSM114775
Status Public on Jul 04, 2008
Title Pineal Culture CT6 NE vs. Vehicle Replicate 4
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 6 hours after beginning of subjective day with 6-hour NE administration
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 6 hours after beginning of subjective day with 6-hour vehicle administration
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture CT6 NE vs. Vehicle Replicate 4
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 15, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.426555479691225
2 -4.60517018598809
3 -0.749837073584679
4 -0.668582966456209
5 -1.1319903704815
6 -0.617629680828547
7 -1.44903626780284
8 null
9 -1.58234895386343
10 -1.13718712244639
11 -1.50053723056591
12 -1.27523152662939
13 -0.521535368901205
14 0.0751864118570967
15 -0.264134179844047
16 0.193100257325491
17 0.451509346942859
18 0.472577501492828
19 -0.675139692975107
20 0.296146026917448

Total number of rows: 8084

Table truncated, full table size 179 Kbytes.




Supplementary data files not provided

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