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Sample GSM114795 Query DataSets for GSM114795
Status Public on Jul 04, 2008
Title Pineal Culture CT6 Vehicle vs. Vehicle Replicate 8
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 6 hours after beginning of subjective day with 6-hour vehicle administration
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 6 hours after beginning of subjective day with 6-hour vehicle administration
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture CT6 Vehicle vs. Vehicle Replicate 8
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 15, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.872932604060389
2 -0.138695101652147
3 -0.328719868033188
4 -0.484869500798063
5 -0.344608550837895
6 -4.60517018598809
7 -0.675851103803228
8 -0.190606131309872
9 -0.180758858443296
10 -0.990073045521903
11 -0.241234001223007
12 -1.31630571891054
13 -0.929306318326861
14 0.272110614121869
15 -0.559737195304999
16 -0.387202342260902
17 -0.108632195102511
18 -0.433886342125858
19 -0.355739010632412
20 0.147849325070007

Total number of rows: 8084

Table truncated, full table size 183 Kbytes.




Supplementary data files not provided

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