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Sample GSM115328 Query DataSets for GSM115328
Status Public on Aug 29, 2007
Title Placebo treated, HIV-1 positive male, day 14 (6)
Sample type RNA
 
Source name Percutaneous biopsies of vastus lateralis
Organism Homo sapiens
Characteristics HIV-1 positive male, 18-60 years old, weight loss of 5-15% in preceding 6 months, stable anti-retroviral therapy. CD4+ T-cells >50/ml, HIV copies =< 10,000/ml, free testosterone <50pg/ml.
Extracted molecule total RNA
Label Biotin
 
Description Sample collected 14d post treatment
Data processing GCOSv1.2
 
Submission date Jun 20, 2006
Last update date Aug 29, 2007
Contact name Monty Montano
E-mail(s) mmontano@bu.edu
Phone 617 414-4806
Fax 617 414-3561
URL http://www.bmc.org/HIV-AIDS/MontyMontano.htm
Organization name Boston Medical Center
Department Medicine
Lab Center for HIV-1/AIDS Care and Research
Street address 650 Albany Street, Bldg X, room 640
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL571
Series (1)
GSE5106 Gene Profiling of Testosterone-Regulated Genes in the Skeletal Muscle of Hiv-Infected Men Experiencing Weight Loss

Data table header descriptions
ID_REF
UNSCALED_VALUE Unscaled intensity values
DETECTION_P-VALUE Quality of measurement
ABS_CALL Present, absent or marginal call
VALUE Scaled intensity values

Data table
ID_REF UNSCALED_VALUE DETECTION_P-VALUE ABS_CALL VALUE
1007_s_at 119.4 0.001892 P 696.9
1053_at 38.5 0.001354 P 224.8
117_at 9.4 0.107301 A 54.9
121_at 44.7 0.014937 P 260.6
1255_g_at 3.5 0.458809 A 20.7
1294_at 41.7 0.003585 P 243.4
1316_at 30.4 0.000959 P 177.7
1320_at 16.5 0.234557 A 96.5
1405_i_at 15.4 0.020663 P 89.9
1431_at 2.8 0.47938 A 16.2
1438_at 5.5 0.302547 A 32
1487_at 208.6 0.001354 P 1217.4
1494_f_at 5.9 0.35869 A 34.2
1598_g_at 228 0.000388 P 1330.5
160020_at 18.9 0.284747 A 110.5
1729_at 17.5 0.397994 A 102.1
177_at 10.7 0.52062 A 62.4
1773_at 41.3 0.011447 P 241.1
179_at 71.2 0.019304 P 415.8
1861_at 52.5 0.001354 P 306.4

Total number of rows: 22277

Table truncated, full table size 692 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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