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Sample GSM116 Query DataSets for GSM116
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-9, tumor 2 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=7.5
sex=f
age=59
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625209 reuse=5 date=15-Mar-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 12767 12996 -229
2 9052 12996 -3944
3 9227 12996 -3769
4 7702 12996 -5294
5 25075 12996 12079
6 737559 12996 724563
7 471931 12996 458935
8 8599 12996 -4397
9 15245 12996 2249
10 7451 12996 -5545
11 18957 12996 5961
12 14443 12996 1447
13 387906 12996 374910
14 12288 12996 -708
15 3841 12996 -9155
16 8453 12996 -4543
17 10085 12321 -2236
18 12123 12321 -198
19 15490 12321 3169
20 6989 12321 -5332

Total number of rows: 36864

Table truncated, full table size 846 Kbytes.




Supplementary data files not provided

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