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Sample GSM1182959 Query DataSets for GSM1182959
Status Public on Jul 10, 2013
Title IUGR islets, e19, replicate 1
Sample type RNA
 
Source name IUGR surgery rat islets, pooled from 1 litter
Organism Rattus norvegicus
Characteristics strain: Sprague-Dawley
treatment: IUGR surgery e19 rat islets, pooled from 1 litter
tissue: pancreatic islet
age: e19
Treatment protocol 4 dams were underwent IUGR surgery, 4 dams underwent sham surgery on e18.
Growth protocol 8 timed pregnant dams purchased from Charles River Laboratories
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from pooled fetal islets at e19 (n=4 different litters per treatment) using RNAzol B.
Label biotin
Label protocol GeneChip WT terminal labeling kit
 
Hybridization protocol standard protocol for Rat Gene 1.0 ST
Scan protocol standard protocol for Rat Gene 1.0 ST
Description IUGR surgery e19 rat islets, pooled from 1 litter
Data processing RMA, then samr v2.0
 
Submission date Jul 09, 2013
Last update date Jul 10, 2013
Contact name Lane Johanna Jaeckle Santos
E-mail(s) ljaeck@mail.med.upenn.edu
Phone 215-746-5138
Organization name University of Pennsylvania School of Medicine
Department CRRWH
Lab Rebecca Simmons'
Street address 421 Curie Blvd, BRB II/III 1341
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platform ID GPL6247
Series (1)
GSE48655 Expression data from growth restricted fetal rat pancreatic islets

Data table header descriptions
ID_REF
VALUE log2 RMA

Data table
ID_REF VALUE
10700001 11.9169
10700002 7.35801
10700003 10.2443
10700004 5.93558
10700005 8.72284
10700006 4.97909
10700007 5.11696
10700008 4.77708
10700009 9.26788
10700010 5.29045
10700011 5.7934
10700012 5.56705
10700013 11.2098
10700014 10.1167
10700015 9.16047
10700016 4.99185
10700017 6.70434
10700018 4.83302
10700019 5.05037
10700020 11.8684

Total number of rows: 29214

Table truncated, full table size 481 Kbytes.




Supplementary file Size Download File type/resource
GSM1182959_4536_44910_I5_RatGene__28RaGene-1_0-st-v1_29.CEL.gz 4.6 Mb (ftp)(http) CEL
GSM1182959_4536_44910_I5_RatGene__28RaGene-1_0-st-v1_29.rma-gene-default.chp.gz 230.6 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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