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Sample GSM1182961 Query DataSets for GSM1182961
Status Public on Jul 10, 2013
Title IUGR islets, e19, replicate 3
Sample type RNA
 
Source name IUGR surgery rat islets, pooled from 1 litter
Organism Rattus norvegicus
Characteristics strain: Sprague-Dawley
treatment: IUGR surgery e19 rat islets, pooled from 1 litter
tissue: pancreatic islet
age: e19
Treatment protocol 4 dams were underwent IUGR surgery, 4 dams underwent sham surgery on e18.
Growth protocol 8 timed pregnant dams purchased from Charles River Laboratories
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from pooled fetal islets at e19 (n=4 different litters per treatment) using RNAzol B.
Label biotin
Label protocol GeneChip WT terminal labeling kit
 
Hybridization protocol standard protocol for Rat Gene 1.0 ST
Scan protocol standard protocol for Rat Gene 1.0 ST
Description IUGR surgery e19 rat islets, pooled from 1 litter
Data processing RMA, then samr v2.0
 
Submission date Jul 09, 2013
Last update date Jul 10, 2013
Contact name Lane Johanna Jaeckle Santos
E-mail(s) ljaeck@mail.med.upenn.edu
Phone 215-746-5138
Organization name University of Pennsylvania School of Medicine
Department CRRWH
Lab Rebecca Simmons'
Street address 421 Curie Blvd, BRB II/III 1341
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platform ID GPL6247
Series (1)
GSE48655 Expression data from growth restricted fetal rat pancreatic islets

Data table header descriptions
ID_REF
VALUE log2 RMA

Data table
ID_REF VALUE
10700001 11.7564
10700002 7.55104
10700003 10.1534
10700004 5.98122
10700005 8.52169
10700006 5.00158
10700007 5.17382
10700008 4.82142
10700009 9.54108
10700010 5.3661
10700011 5.9361
10700012 5.68635
10700013 10.9444
10700014 9.89398
10700015 9.38578
10700016 5.02183
10700017 6.88533
10700018 4.84741
10700019 5.10215
10700020 11.6755

Total number of rows: 29214

Table truncated, full table size 481 Kbytes.




Supplementary file Size Download File type/resource
GSM1182961_4536_44912_I7_RatGene__28RaGene-1_0-st-v1_29.CEL.gz 4.6 Mb (ftp)(http) CEL
GSM1182961_4536_44912_I7_RatGene__28RaGene-1_0-st-v1_29.rma-gene-default.chp.gz 230.7 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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