NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM119455 Query DataSets for GSM119455
Status Public on Nov 01, 2006
Title Ethylbenzene 2ndEtcy3Pycy5
Sample type RNA
 
Channel 1
Source name experiment
Organism Rhodococcus jostii RHA1
Characteristics experiment
Extracted molecule total RNA
Label cy3
 
Channel 2
Source name control
Organism Rhodococcus jostii RHA1
Characteristics control
Extracted molecule total RNA
Label cy5
 
 
Description ehtylbenze vs. pyruvate
Data processing Normalized log ratio of means after background subtraction (CH1-BG1)/(CH2-BG2)
 
Submission date Jul 09, 2006
Last update date Nov 01, 2006
Contact name Michael McLeod
Fax 604-822-6041
Organization name University of British Columbia
Department Microbiology & Immunology
Lab Mohn
Street address 4506 - 2350 Health Sciences Mall
City Vancouver
State/province British Columbia
ZIP/Postal code V6T 1Z3
Country Canada
 
Platform ID GPL3918
Series (2)
GSE5269 Effects of ethylbenzene on Rhodococcus sp. RHA1
GSE5280 Effect of biphenyl, ethylbenzene, and benzoate on Rhodococcus sp. RHA1

Data table header descriptions
ID_REF
VALUE log2 ratio of means defined as CH1 divided by CH2 log(CH1/CH2)
Experiment Signal Mean
Experiment Background
Control Signal Mean
Control Background Mean
RATIO Normalized ratio of means after background subtraction (CH1-BG1)/(CH2-BG2)

Data table
ID_REF VALUE Experiment Signal Mean Experiment Background Control Signal Mean Control Background Mean RATIO
1 0.879077560900964186 116.36585365853658 112.03809523809524 48.31111111111111 46.46349206349206 2.34234347498113461
2 0.546445422306039393 219.13888888888889 113.85416666666667 126.88235294117646 47.265517241379314 1.32239269869011477
3 0.669852129270395337 219.94444444444446 112.99652777777777 112.56410256410257 46.94385964912281 1.62980068216499496
4 0.839356136669321752 112.04 110.1910447761194 48.4 47.4984802431611 2.05093145197815676
5 0.869793813327875215 118.08 108.65930599369085 49.48 47.77917981072555 5.53891238222419495
6 0.839411497953334695 111.36290322580645 108.89908256880734 48.104838709677416 48.105990783410135 -2138.59633027503065
7 0.809968131041319022 114.28 109.38485804416403 50.84 48.93375394321767 2.56794863308401082
8 0.801553717613887847 114.38620689655173 110.8 51.317241379310346 51.280851063829786 98.5483870967678351
9 0.851841692191612147 124.17777777777778 115.25102880658436 52.977777777777774 51.958847736625515 8.76090468497580927
10 0.810393303451752687 116.375 110.95161290322581 51.75 50.04838709677419 3.18720379146918558
11 0.85494411732650566 117.28 109.00281690140845 49.88 47.780281690140846 3.94204453984438094
12 0.827060735963798704 110.87586206896552 111.48290598290598 48.48965517241379 48.13793103448276 -1.72590916708564357
13 0.868895820302057629 118.46875 111.20060790273556 49.6875 49.015197568389056 10.8108222661768614
14 0.828985379282382946 119.04 109.2338028169014 51.96 49.53239436619718 4.0394523091204439
15 0.834328090030179395 118.48 111.05362776025237 51.44 49.48264984227129 3.79409489427539107
16 0.943430680914492936 132.96 117.06309148264984 51.76 49.662460567823345 7.57883655176563119
17 0.890774416305321324 138.52 125.01892744479495 56.84 53.27444794952682 3.78653077113636285
18 0.791321744827952444 145.44 130.37792642140468 65.92 56.735785953177256 1.63999592145895237
19 0.824052751106800363 130.4 127.70967741935483 57.2 54.562724014336915 1.02011416145691995
20 0.85952653677570331 134.6888888888889 121.4169014084507 57.022222222222226 54.222535211267605 4.74052543320290466

Total number of rows: 22080

Table truncated, full table size 2464 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap
External link. Please review our privacy policy.