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Sample GSM1194910 Query DataSets for GSM1194910
Status Public on Jul 24, 2013
Title MEP2 [miRNA]
Sample type RNA
 
Source name MEP
Organism Mus musculus
Characteristics tissue: Bone marrow
cell type: MEP
gender: female
Extracted molecule total RNA
Extraction protocol RNA was isolated from Trizol using a miRNeasy Micro kit according to manufacturer’s instructions (Qiagen)
Label Cy3
Label protocol Standard Aglient protocol by Cogenics – Beckman Coulter Genomics
 
Hybridization protocol Standard Aglient protocol by Cogenics – Beckman Coulter Genomics
Scan protocol Standard Aglient protocol by Cogenics – Beckman Coulter Genomics
Description miR expression in MEPs
Sample name: 251911910232_2_4
Data processing normalization was performed via the quantile method in the limma bioconductor package in R
 
Submission date Jul 24, 2013
Last update date Jul 24, 2013
Contact name Curt I Civin
E-mail(s) ccivin@som.umaryland.edu
Phone 410-706-1198
Organization name University of Maryland School of Medicine
Department Center for Stem Cell Biology & Regenerative Medicine
Street address BRB 14-021, 655 W Baltimore St
City Baltimore
State/province Maryland
ZIP/Postal code 21201
Country USA
 
Platform ID GPL7732
Series (2)
GSE49167 miR expression profiling of mouse hematopoietic stem and progenitor populations [miRNA]
GSE49170 miR expression profiling of mouse hematopoietic stem and progenitor populations

Data table header descriptions
ID_REF
VALUE Quantile normalized intensity

Data table
ID_REF VALUE
1 9.204401326
2 5.67438846
3 5.309350029
4 5.309350029
5 5.428127499
6 5.458976151
7 5.539158811
8 5.309350029
9 5.923162389
10 5.443404053
11 5.309350029
12 9.112186075
13 10.41142271
14 5.309350029
15 5.716152583
16 5.539158811
17 5.9065566
18 5.748938236
19 5.976325444
20 5.716152583

Total number of rows: 12493

Table truncated, full table size 206 Kbytes.




Supplementary file Size Download File type/resource
GSM1194910_US23502303_251911910232_S01_miRNA-v1_95_May07_2_4.txt.gz 1.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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