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Sample GSM1199225 Query DataSets for GSM1199225
Status Public on Aug 02, 2013
Title Day-49 triple 1
Sample type RNA
 
Source name one-phase culture
Organism Homo sapiens
Characteristics cell type: one-phase culture
days in culture: day-21
tissue: CD34 cells from umbilical cord blood
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by quality check using the BioRad Experion system
Label biotin-UTP
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPre RNA amplification kit with T-7 RNA polymerase IVT for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description triple 1
Data processing The data were normalized using quantile normalization with Model Base Background Correction (MBCB)
 
Submission date Aug 01, 2013
Last update date Aug 02, 2013
Contact name Biaoru Li
E-mail(s) BLI@augusta.edu
Phone 706-721-9648
Organization name MCG
Department Pediatrics
Lab Pace Lab
Street address 1120 15th St, CN-4111
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL10558
Series (1)
GSE49438 Characterization of Transcription Factor Networks Involved in Umbilical Cord Blood CD34+ Stem Cells-Derived Erythropoiesis

Data table header descriptions
ID_REF
VALUE Quantile Normalized
Detection.Pval

Data table
ID_REF VALUE Detection.Pval
ILMN_1762337 7.61212097 0.06967243
ILMN_2055271 26.45565947 0.242144086
ILMN_1736007 5.7185114 0.052340548
ILMN_2383229 53.00550764 0.485150266
ILMN_1806310 55.53913808 0.508340148
ILMN_1779670 9.189709482 0.084111825
ILMN_1653355 14.97031299 0.137020692
ILMN_1717783 2.802500364 0.025650802
ILMN_1705025 18.49817605 0.169310614
ILMN_1814316 4.767578918 0.043636827
ILMN_2359168 4.549542386 0.041641176
ILMN_1731507 3.416351151 0.031269273
ILMN_1787689 8.710183174 0.079722804
ILMN_3241953 64.33049031 0.588805878
ILMN_1745607 19.26424149 0.176322278
ILMN_2136495 3.660355871 0.033502606
ILMN_1668111 6.055195998 0.055422164
ILMN_2295559 4.259576339 0.038987167
ILMN_1735045 59.87972385 0.548068781
ILMN_1680754 16.25783205 0.148805132

Total number of rows: 47323

Table truncated, full table size 1699 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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