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Sample GSM1199226 Query DataSets for GSM1199226
Status Public on Aug 02, 2013
Title Day-49 triple 2
Sample type RNA
 
Source name one-phase culture
Organism Homo sapiens
Characteristics cell type: one-phase culture
days in culture: day-21
tissue: CD34 cells from umbilical cord blood
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by quality check using the BioRad Experion system
Label biotin-UTP
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPre RNA amplification kit with T-7 RNA polymerase IVT for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description triple 2
Data processing The data were normalized using quantile normalization with Model Base Background Correction (MBCB)
 
Submission date Aug 01, 2013
Last update date Aug 02, 2013
Contact name Biaoru Li
E-mail(s) BLI@augusta.edu
Phone 706-721-9648
Organization name MCG
Department Pediatrics
Lab Pace Lab
Street address 1120 15th St, CN-4111
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL10558
Series (1)
GSE49438 Characterization of Transcription Factor Networks Involved in Umbilical Cord Blood CD34+ Stem Cells-Derived Erythropoiesis

Data table header descriptions
ID_REF
VALUE Quantile Normalized
Detection.Pval

Data table
ID_REF VALUE Detection.Pval
ILMN_1762337 6.260507644 0.076338876
ILMN_2055271 19.58084852 0.265313085
ILMN_1736007 4.582564052 0.057348633
ILMN_2383229 17.95419495 0.531570751
ILMN_1806310 21.78504648 0.556979504
ILMN_1779670 8.207430314 0.092159871
ILMN_1653355 12.44859 0.150131201
ILMN_1717783 3.372716045 0.02810514
ILMN_1705025 6.785014591 0.18551071
ILMN_1814316 6.78812863 0.047812116
ILMN_2359168 6.726715701 0.045625516
ILMN_1731507 3.578329955 0.034261201
ILMN_1787689 6.097584439 0.087350896
ILMN_3241953 61.64079395 0.645144412
ILMN_1745607 25.98149963 0.193193269
ILMN_2136495 4.692073563 0.036708225
ILMN_1668111 3.571736266 0.060725106
ILMN_2295559 6.525227781 0.042717565
ILMN_1735045 89.69244838 0.600509479
ILMN_1680754 11.18318672 0.163043208

Total number of rows: 47323

Table truncated, full table size 1699 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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