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Sample GSM1199227 Query DataSets for GSM1199227
Status Public on Aug 02, 2013
Title Day-49 triple 3
Sample type RNA
 
Source name one-phase culture
Organism Homo sapiens
Characteristics cell type: one-phase culture
days in culture: day-21
tissue: CD34 cells from umbilical cord blood
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by quality check using the BioRad Experion system
Label biotin-UTP
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPre RNA amplification kit with T-7 RNA polymerase IVT for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description triple 3
Data processing The data were normalized using quantile normalization with Model Base Background Correction (MBCB)
 
Submission date Aug 01, 2013
Last update date Aug 02, 2013
Contact name Biaoru Li
E-mail(s) BLI@augusta.edu
Phone 706-721-9648
Organization name MCG
Department Pediatrics
Lab Pace Lab
Street address 1120 15th St, CN-4111
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL10558
Series (1)
GSE49438 Characterization of Transcription Factor Networks Involved in Umbilical Cord Blood CD34+ Stem Cells-Derived Erythropoiesis

Data table header descriptions
ID_REF
VALUE Quantile Normalized
Detection.Pval

Data table
ID_REF VALUE Detection.Pval
ILMN_1762337 16.59859559 0.045803325
ILMN_2055271 25.70565561 0.159187851
ILMN_1736007 7.583483536 0.03440918
ILMN_2383229 17.93040244 0.318942451
ILMN_1806310 16.22428242 0.334187702
ILMN_1779670 10.41877608 0.055295923
ILMN_1653355 9.532371423 0.090078721
ILMN_1717783 3.019042836 0.016863084
ILMN_1705025 8.11215318 0.111306426
ILMN_1814316 4.111575544 0.02868727
ILMN_2359168 5.621298004 0.02737531
ILMN_1731507 4.882878727 0.020556721
ILMN_1787689 5.833363902 0.052410538
ILMN_3241953 54.01840069 0.387086647
ILMN_1745607 18.57843587 0.115915962
ILMN_2136495 4.397060589 0.022024935
ILMN_1668111 6.216196296 0.036435064
ILMN_2295559 4.728823782 0.025630539
ILMN_1735045 77.98597771 0.360305687
ILMN_1680754 31.0806452 0.097825925

Total number of rows: 47323

Table truncated, full table size 1699 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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