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Sample GSM1199228 Query DataSets for GSM1199228
Status Public on Aug 02, 2013
Title Day-56 triple 1
Sample type RNA
 
Source name one-phase culture
Organism Homo sapiens
Characteristics cell type: one-phase culture
days in culture: day-28
tissue: CD34 cells from umbilical cord blood
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by quality check using the BioRad Experion system
Label biotin-UTP
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPre RNA amplification kit with T-7 RNA polymerase IVT for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description triple 1
Data processing The data were normalized using quantile normalization with Model Base Background Correction (MBCB)
 
Submission date Aug 01, 2013
Last update date Aug 02, 2013
Contact name Biaoru Li
E-mail(s) BLI@augusta.edu
Phone 706-721-9648
Organization name MCG
Department Pediatrics
Lab Pace Lab
Street address 1120 15th St, CN-4111
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL10558
Series (1)
GSE49438 Characterization of Transcription Factor Networks Involved in Umbilical Cord Blood CD34+ Stem Cells-Derived Erythropoiesis

Data table header descriptions
ID_REF
VALUE Quantile Normalized
Detection.Pval

Data table
ID_REF VALUE Detection.Pval
ILMN_1762337 7.628071794 0.069818425
ILMN_2055271 28.36301957 0.259601824
ILMN_1736007 5.307655342 0.048580054
ILMN_2383229 38.24599991 0.350059038
ILMN_1806310 48.79112908 0.446576786
ILMN_1779670 10.67378642 0.097695325
ILMN_1653355 12.92731722 0.118321504
ILMN_1717783 3.602788928 0.032975705
ILMN_1705025 8.01396989 0.073350484
ILMN_1814316 5.928575803 0.054263231
ILMN_2359168 3.906101121 0.03575187
ILMN_1731507 3.41486051 0.031255629
ILMN_1787689 8.071004227 0.073872509
ILMN_3241953 44.89209339 0.410889585
ILMN_1745607 76.45229242 0.699754641
ILMN_2136495 4.157266523 0.038050743
ILMN_1668111 5.687353359 0.052055364
ILMN_2295559 5.862921445 0.053662308
ILMN_1735045 19.79191714 0.181152003
ILMN_1680754 10.20360408 0.093391828

Total number of rows: 47323

Table truncated, full table size 1699 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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