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Sample GSM1199229 Query DataSets for GSM1199229
Status Public on Aug 02, 2013
Title Day-56 triple 2
Sample type RNA
 
Source name one-phase culture
Organism Homo sapiens
Characteristics cell type: one-phase culture
days in culture: day-28
tissue: CD34 cells from umbilical cord blood
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by quality check using the BioRad Experion system
Label biotin-UTP
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPre RNA amplification kit with T-7 RNA polymerase IVT for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description triple 2
Data processing The data were normalized using quantile normalization with Model Base Background Correction (MBCB)
 
Submission date Aug 01, 2013
Last update date Aug 02, 2013
Contact name Biaoru Li
E-mail(s) BLI@augusta.edu
Phone 706-721-9648
Organization name MCG
Department Pediatrics
Lab Pace Lab
Street address 1120 15th St, CN-4111
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL10558
Series (1)
GSE49438 Characterization of Transcription Factor Networks Involved in Umbilical Cord Blood CD34+ Stem Cells-Derived Erythropoiesis

Data table header descriptions
ID_REF
VALUE Quantile Normalized
Detection.Pval

Data table
ID_REF VALUE Detection.Pval
ILMN_1762337 5.502497828 0.07649884
ILMN_2055271 14.13178148 0.284441227
ILMN_1736007 7.44204722 0.053228324
ILMN_2383229 25.26846605 0.383553631
ILMN_1806310 35.07859608 0.489306457
ILMN_1779670 14.65645317 0.107043078
ILMN_1653355 7.436491783 0.129642824
ILMN_1717783 3.318144163 0.03613091
ILMN_1705025 11.84735845 0.080368856
ILMN_1814316 6.961816156 0.059455284
ILMN_2359168 4.389357674 0.039172705
ILMN_1731507 4.50171377 0.034246252
ILMN_1787689 7.703652712 0.08094083
ILMN_3241953 55.71642337 0.450204608
ILMN_1745607 115.2762569 0.766709052
ILMN_2136495 7.363288114 0.041691541
ILMN_1668111 9.243574625 0.057036162
ILMN_2295559 8.479468582 0.058796863
ILMN_1735045 27.63007778 0.198485115
ILMN_1680754 8.063297303 0.102327809

Total number of rows: 47323

Table truncated, full table size 1699 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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