NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1199230 Query DataSets for GSM1199230
Status Public on Aug 02, 2013
Title Day-56 triple 3
Sample type RNA
 
Source name one-phase culture
Organism Homo sapiens
Characteristics cell type: one-phase culture
days in culture: day-28
tissue: CD34 cells from umbilical cord blood
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by quality check using the BioRad Experion system
Label biotin-UTP
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPre RNA amplification kit with T-7 RNA polymerase IVT for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description triple 3
Data processing The data were normalized using quantile normalization with Model Base Background Correction (MBCB)
 
Submission date Aug 01, 2013
Last update date Aug 02, 2013
Contact name Biaoru Li
E-mail(s) BLI@augusta.edu
Phone 706-721-9648
Organization name MCG
Department Pediatrics
Lab Pace Lab
Street address 1120 15th St, CN-4111
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL10558
Series (1)
GSE49438 Characterization of Transcription Factor Networks Involved in Umbilical Cord Blood CD34+ Stem Cells-Derived Erythropoiesis

Data table header descriptions
ID_REF
VALUE Quantile Normalized
Detection.Pval

Data table
ID_REF VALUE Detection.Pval
ILMN_1762337 7.917112724 0.068848956
ILMN_2055271 23.46876898 0.255997104
ILMN_1736007 7.791931618 0.047905492
ILMN_2383229 35.64680214 0.345198267
ILMN_1806310 58.91664891 0.440375811
ILMN_1779670 16.27136721 0.09633877
ILMN_1653355 8.33974708 0.116678542
ILMN_1717783 4.122833624 0.032517819
ILMN_1705025 8.442451826 0.07233197
ILMN_1814316 6.386245516 0.053509755
ILMN_2359168 3.899064117 0.035255434
ILMN_1731507 5.201577793 0.030821627
ILMN_1787689 12.30940464 0.072846747
ILMN_3241953 52.72162167 0.405184147
ILMN_1745607 99.43514373 0.690038146
ILMN_2136495 3.733885905 0.037522387
ILMN_1668111 5.517708797 0.051332545
ILMN_2295559 4.527554689 0.052917176
ILMN_1735045 29.09652338 0.178636603
ILMN_1680754 15.3573355 0.092095028

Total number of rows: 47323

Table truncated, full table size 1699 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap
External link. Please review our privacy policy.