|
Status |
Public on Jun 17, 2014 |
Title |
MDAMB231 |
Sample type |
genomic |
|
|
Source name |
breast cancer cell line
|
Organism |
Homo sapiens |
Characteristics |
cell line: MDAMB231 cell type: breast cancer subtype: Basal-like cells
|
Extracted molecule |
genomic DNA |
Extraction protocol |
standard procedure
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
HumanMethylation450_4
|
Data processing |
BeadStudio software
|
|
|
Submission date |
Aug 12, 2013 |
Last update date |
Jun 17, 2014 |
Contact name |
Kornelia Polyak |
E-mail(s) |
kornelia_polyak@dfci.harvard.edu
|
Phone |
617-632-2106
|
Organization name |
Dana-Farber Cancer Institute
|
Department |
Medical Oncology
|
Lab |
Polyak
|
Street address |
450 Brookline Ave
|
City |
Boston |
State/province |
MA |
ZIP/Postal code |
02215 |
Country |
USA |
|
|
Platform ID |
GPL13534 |
Series (2) |
GSE46073 |
Gene expression and genome-wide location analysis of breast cancer cell-lines |
GSE49794 |
DNA methylation analysis of breast cancer cell-lines |
|