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Status
Public on Aug 30, 2006
Title
Control Group, Line 1, Replicate 1, Female
Sample type
RNA
Source name
Female Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult female flies of the control group of an artificial selection experiment for aggression.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Jul 28, 2006
Last update date
Aug 28, 2018
Contact name
Alexis Edwards
E-mail(s)
acedward@ncsu.edu Organization name
North Carolina State University
Department
Genetics
Lab
Trudy Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322 Series (1)
GSE5404 Expression data from Drosophila subjected to artificial selection on aggression
Relations Reanalyzed by
GSE119084
Data table header descriptions ID_REF Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE 'P_Value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 1616608_a_at
13425.9
P
0.0005
1622892_s_at
417.6
P
0.0006
1622893_at
12648.6
P
0.0005
1622894_at
124.8
P
0.0368
1622895_at
829.6
P
0.0021
1622896_at
379.4
P
0.0005
1622897_at
27.5
A
0.3888
1622898_a_at
941.5
P
0.0005
1622899_at
39.0
A
0.0701
1622900_at
19.1
A
0.1984
1622901_at
318.5
P
0.0038
1622902_at
420.2
P
0.0177
1622903_s_at
700.6
P
0.0005
1622904_at
35.0
A
0.3888
1622905_at
7.4
A
0.6584
1622906_at
883.6
P
0.0006
1622907_at
538.7
P
0.0005
1622908_a_at
267.7
P
0.0038
1622909_at
913.4
P
0.0005
1622910_at
37.3
A
0.0789
18769 473 Kbytes .Supplementary file Size Download File type/resource GSM123491.CEL.gz
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