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Status
Public on Aug 30, 2006
Title
High Group 2, Line 1, Replicate 1, Male
Sample type
RNA
Source name
Male Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult male flies of the high group of an artificial selection experiment for aggression.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Jul 28, 2006
Last update date
Aug 28, 2018
Contact name
Alexis Edwards
E-mail(s)
acedward@ncsu.edu Organization name
North Carolina State University
Department
Genetics
Lab
Trudy Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322 Series (1)
GSE5404 Expression data from Drosophila subjected to artificial selection on aggression
Relations Reanalyzed by
GSE119084
Data table header descriptions ID_REF Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE 'P_Value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 1616608_a_at
18064.1
P
0.0005
1622892_s_at
810.4
P
0.0005
1622893_at
18048.7
P
0.0005
1622894_at
133.8
P
0.0177
1622895_at
130.8
P
0.0129
1622896_at
303.6
P
0.0006
1622897_at
31.5
A
0.1813
1622898_a_at
474.9
P
0.0005
1622899_at
41.6
P
0.0177
1622900_at
42.5
M
0.0547
1622901_at
321.0
P
0.0021
1622902_at
400.5
P
0.0026
1622903_s_at
208.9
P
0.0005
1622904_at
30.2
A
0.2163
1622905_at
4.3
A
0.6811
1622906_at
482.2
P
0.0009
1622907_at
591.5
P
0.0005
1622908_a_at
205.6
P
0.0093
1622909_at
340.9
P
0.0006
1622910_at
28.7
A
0.1653
18769 475 Kbytes .Supplementary file Size Download File type/resource GSM123500.CEL.gz
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