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GEO accession:
Sample GSM124865
Query DataSets for GSM124865
Status
Public on Oct 16, 2006
Title
p53 family members in myogenic differentiation DeltaNp73 6h
Sample type
RNA
Source name
C2C12 myoblast
Organism
Mus musculus
Characteristics
DeltaNp73 6h
Extracted molecule
total RNA
Label
Biotin
Label protocol
Approximately 5 ?g of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol
standard Affymetrix procedures
Scan protocol
tandard Affymetrix procedures
Description
DeltaNp73 6h after differentiation
Data processing
normalization on target 500
Submission date
Aug 03, 2006
Last update date
Jan 03, 2008
Contact name
Christof Burek
E-mail(s)
christof.burek@mail.uni-wuerzburg.de
Phone
++49 (0)931 20147696
Organization name
Universitaet Wuerzburg
Department
Pathologie
Lab
Rosenwald
Street address
Josef-schneider-Str. 2
City
Wuerzburg
ZIP/Postal code
97080
Country
Germany
Platform ID
GPL1261
Series (2)
GSE5447
p53 family members in myogenic differentiation and rhabdomyosarcoma development
GSE8660
C-terminal diversity within the p53 family accounts for differences in DNA binding and transcriptional activity
Data table header descriptions
ID_REF
VALUE
GCOS calculated intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
427.2
P
0.000446
AFFX-BioB-M_at
677.6
P
0.000044
AFFX-BioB-3_at
358.5
P
0.00006
AFFX-BioC-5_at
1504.7
P
0.000052
AFFX-BioC-3_at
1653.3
P
0.000044
AFFX-BioDn-5_at
2802.8
P
0.000044
AFFX-BioDn-3_at
5879.8
P
0.000052
AFFX-CreX-5_at
14831.7
P
0.000052
AFFX-CreX-3_at
21293.8
P
0.000044
AFFX-DapX-5_at
284.7
P
0.000095
AFFX-DapX-M_at
609.8
P
0.000754
AFFX-DapX-3_at
807.5
P
0.00007
AFFX-LysX-5_at
39
A
0.116113
AFFX-LysX-M_at
80.1
A
0.083592
AFFX-LysX-3_at
127.3
P
0.00034
AFFX-PheX-5_at
59.7
P
0.033677
AFFX-PheX-M_at
38.1
P
0.039661
AFFX-PheX-3_at
143
P
0.021902
AFFX-ThrX-5_at
116.9
P
0.009332
AFFX-ThrX-M_at
85.9
P
0.002556
Total number of rows:
45101
Table truncated, full table size
1209 Kbytes
.
Supplementary data files not provided
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