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Sample GSM12532 Query DataSets for GSM12532
Status Public on Oct 31, 2003
Title rat hippocampus: control group for SE
Sample type SAGE
Anchor NlaIII
Tag Count 10466
Tag Length 10
 
Source name rat hippocampus (Sprague Dawley)
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Hippocampus RNA pooled from 6 rats was used to generate the SAGE library. The rats were control animals for a group of rats in which status epilepticus (SE) was induced by electrical stimulation.The control rats were sham-operated and had electrodes implanted but no electrical stimulation.
 
Submission date Oct 30, 2003
Last update date Nov 19, 2008
Contact name Nicole Datson
E-mail(s) datson_n@lacdr.leidenuniv.nl
Phone (+31)71-5276222
Organization name Leiden University
Department Medical Pharmacology
Street address
City Leiden
ZIP/Postal code 2333 CC
Country Netherlands
 
Platform ID GPL23
Series (1)
GSE785 epileptogenesis

Data table header descriptions
TAG SAGE tag sequence
COUNT SAGE tag count
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 2 191.09
AAAAAAACAG 3 286.64
AAAAAAGTTT 1 95.55
AAAAACTGCT 1 95.55
AAAAAGAAGT 1 95.55
AAAAATCATC 18 1719.85
AAAACAACCA 1 95.55
AAAACAGCCC 1 95.55
AAAACAGGAC 1 95.55
AAAACAGTGG 4 382.19
AAAACATTTT 1 95.55
AAAAGACAAA 1 95.55
AAAAGCAAGC 1 95.55
AAAAGCGTGG 1 95.55
AAAAGGAAGC 2 191.09
AAAAGGATGG 1 95.55
AAAAGGCAGT 1 95.55
AAAAGGGACA 1 95.55
AAAAGGGCAG 1 95.55
AAAATCCATC 1 95.55

Total number of rows: 5902

Table truncated, full table size 110 Kbytes.




Supplementary data files not provided
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