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Sample GSM1253464 Query DataSets for GSM1253464
Status Public on Jan 01, 2016
Title F4-luc_bm#2 (miRNA)
Sample type RNA
 
Source name lung cancer brain metastatic cell line clone #2
Organism Homo sapiens
Characteristics cell line: lung cancer brain metastatic cell line
Treatment protocol No treatment
Growth protocol Cells were cultured in DME/F12+10% FBS+1%PS media under 1% O2 condition for 24h incubation.
Extracted molecule total RNA
Extraction protocol Total RNA of cells was isolated with Trizol solution and purified with QIAGEN columns.
Label biotin
Label protocol Standard Illumina label protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scan protocol
Description S2
Data processing Standard Illumina data processing procedures
 
Submission date Oct 29, 2013
Last update date Jan 01, 2016
Contact name Mong-Hsun Tsai
E-mail(s) motiont@gmail.com
Phone +886-2-3366-6009
Organization name National Taiwan University
Department Institute of Biotechnology
Street address 4F, No. 81, Chang-Xing St.
City Taipei
ZIP/Postal code 106
Country Taiwan
 
Platform ID GPL8179
Series (2)
GSE51833 ADAM9 Up-regulates N-Cadherin via MiR-218 Suppression in Lung Adenocarcinoma Cells [miRNA]
GSE52051 ADAM9 Up-regulates N-Cadherin via MiR-218 Suppression in Lung Adenocarcinoma Cells

Data table header descriptions
ID_REF
VALUE quantile-normalized signal (No log transformation)
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_3167304 -51.325 0.54013
ILMN_3168038 1343.68 0
ILMN_3167890 21044.4 0
ILMN_3167526 -133.325 0.76517
ILMN_3167209 390.8 0.0003
ILMN_3168219 329.55 0.00201
ILMN_3167464 1414.68 0
ILMN_3167213 -98.2 0.67593
ILMN_3167057 726.925 0
ILMN_3168313 -35.075 0.49764
ILMN_3166972 47.925 0.24217
ILMN_3168149 1214.55 0
ILMN_3168527 -25.075 0.46223
ILMN_3167562 -11.95 0.42363
ILMN_3168099 1960.55 0
ILMN_3168017 1262.3 0
ILMN_3167545 -86.45 0.64996
ILMN_3167951 767.3 0
ILMN_3167172 109.8 0.11562
ILMN_3167994 123.05 0.09614

Total number of rows: 1145

Table truncated, full table size 28 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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