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Sample GSM1253465 Query DataSets for GSM1253465
Status Public on Jan 01, 2016
Title F4-luc_bm#7 (miRNA)
Sample type RNA
 
Source name lung cancer brain metastatic cell line clone #7
Organism Homo sapiens
Characteristics cell line: lung cancer brain metastatic cell line
Treatment protocol No treatment
Growth protocol Cells were cultured in DME/F12+10% FBS+1%PS media under 1% O2 condition for 24h incubation.
Extracted molecule total RNA
Extraction protocol Total RNA of cells was isolated with Trizol solution and purified with QIAGEN columns.
Label biotin
Label protocol Standard Illumina label protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scan protocol
Description S3
Data processing Standard Illumina data processing procedures
 
Submission date Oct 29, 2013
Last update date Jan 01, 2016
Contact name Mong-Hsun Tsai
E-mail(s) motiont@gmail.com
Phone +886-2-3366-6009
Organization name National Taiwan University
Department Institute of Biotechnology
Street address 4F, No. 81, Chang-Xing St.
City Taipei
ZIP/Postal code 106
Country Taiwan
 
Platform ID GPL8179
Series (2)
GSE51833 ADAM9 Up-regulates N-Cadherin via MiR-218 Suppression in Lung Adenocarcinoma Cells [miRNA]
GSE52051 ADAM9 Up-regulates N-Cadherin via MiR-218 Suppression in Lung Adenocarcinoma Cells

Data table header descriptions
ID_REF
VALUE quantile-normalized signal (No log transformation)
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_3167304 -148.95 0.7996
ILMN_3168038 2612.68 0
ILMN_3167890 20147.3 0
ILMN_3167526 -109.95 0.74457
ILMN_3167209 206.55 0.15128
ILMN_3168219 283.55 0.07983
ILMN_3167464 856.675 0
ILMN_3167213 -100.2 0.73171
ILMN_3167057 1616.3 0
ILMN_3168313 -64.7 0.65934
ILMN_3166972 37.05 0.46494
ILMN_3168149 1328.05 0
ILMN_3168527 -6.575 0.54555
ILMN_3167562 9.925 0.51807
ILMN_3168099 1832.8 0
ILMN_3168017 1488.18 0
ILMN_3167545 -41.325 0.60735
ILMN_3167951 436.55 0.01253
ILMN_3167172 103.175 0.32871
ILMN_3167994 97.8 0.33949

Total number of rows: 1145

Table truncated, full table size 28 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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