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Sample GSM1258006 Query DataSets for GSM1258006
Status Public on Jan 01, 2016
Title F4-luc_bm#2 (mRNA)
Sample type RNA
 
Source name lung cancer brain metastatic cell line clone #2
Organism Homo sapiens
Characteristics cell line: lung cancer brain metastatic
Treatment protocol No treatment
Growth protocol Cells were cultured in DME/F12+10% FBS+1%PS media under 1% O2 condition for 24h incubation.
Extracted molecule total RNA
Extraction protocol Total RNA of cells was isolated with Trizol solution and purified with QIAGEN columns.
Label biotin
Label protocol Standard Illumina label protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scan protocol
Description S2
Data processing Standard Illumina data processing procedures
 
Submission date Nov 04, 2013
Last update date Jan 01, 2016
Contact name Mong-Hsun Tsai
E-mail(s) motiont@gmail.com
Phone +886-2-3366-6009
Organization name National Taiwan University
Department Institute of Biotechnology
Street address 4F, No. 81, Chang-Xing St.
City Taipei
ZIP/Postal code 106
Country Taiwan
 
Platform ID GPL6883
Series (2)
GSE52050 ADAM9 Up-regulates N-Cadherin via MiR-218 Suppression in Lung Adenocarcinoma Cells [mRNA]
GSE52051 ADAM9 Up-regulates N-Cadherin via MiR-218 Suppression in Lung Adenocarcinoma Cells

Data table header descriptions
ID_REF
VALUE Quantile-normalized signal (No log transformation)
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 -2.38603 0.6948357
ILMN_2055271 12.9575 0.0172144
ILMN_2383229 0.632176 0.4553991
ILMN_1806310 6.96281 0.09076682
ILMN_1779670 6.51139 0.09859155
ILMN_1717783 -2.56839 0.7057903
ILMN_1814316 -3.0631 0.743349
ILMN_2359168 -0.57917 0.5305164
ILMN_1731507 -6.42076 0.9499217
ILMN_1787689 6.71999 0.09546166
ILMN_1745607 -8.6993 0.9890454
ILMN_2136495 4.49338 0.170579
ILMN_1668111 -1.44762 0.6071988
ILMN_2295559 -0.29261 0.5211267
ILMN_1735045 257.154 0
ILMN_1680754 6.41206 0.1064163
ILMN_2375184 1.41112 0.3865415
ILMN_1659452 3.15473 0.2488263
ILMN_1767388 -0.0602093 0.5070422
ILMN_1675204 -4.59108 0.8669797

Total number of rows: 24526

Table truncated, full table size 644 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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