GEO help: Mouse over screen elements for information.
Status
Public on Mar 16, 2004
Title
germ cells on MSC1 day 20 GPL341
Sample type
RNA
Source name
germ cells from 22 day old rat testis, cultured for 20 days
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
50 ng total RNA were amplified using two rounds of amplification. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 1.098).
Submission date
Nov 10, 2003
Last update date
May 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL341 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
539.8
P
0.002023
AFFX-BioB-M_at
784.7
P
0.000044
AFFX-BioB-3_at
609.4
P
0.000052
AFFX-BioC-5_at
1400.5
P
0.000044
AFFX-BioC-3_at
822.5
P
0.000044
AFFX-BioDn-5_at
1119.1
P
0.00006
AFFX-BioDn-3_at
4154.6
P
0.000052
AFFX-CreX-5_at
13460
P
0.000044
AFFX-CreX-3_at
12142.6
P
0.000044
AFFX-DapX-5_at
1.5
A
0.48511
AFFX-DapX-M_at
18
A
0.300606
AFFX-DapX-3_at
3.4
A
0.860518
AFFX-LysX-5_at
1.1
A
0.986189
AFFX-LysX-M_at
6.7
A
0.737173
AFFX-LysX-3_at
4
A
0.51489
AFFX-PheX-5_at
3.8
A
0.953518
AFFX-PheX-M_at
2.9
A
0.814869
AFFX-PheX-3_at
6.4
A
0.772364
AFFX-ThrX-5_at
10.5
A
0.60308
AFFX-ThrX-M_at
13.5
A
0.455413
15923 423 Kbytes .Supplementary file Size Download File type/resource GSM12793.CEL.gz
2.5 Mb
(ftp) (http) CEL
