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Status
Public on Mar 16, 2004
Title
testis interstitial cells GPL342
Sample type
RNA
Source name
22 day old testis, interstitial cells
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
50 ng total RNA were amplified using two rounds of amplification. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 1.047).
Submission date
Nov 10, 2003
Last update date
May 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL342 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
254.6
P
0.010317
AFFX-BioB-M_at
236.8
P
0.00011
AFFX-BioB-3_at
185.9
P
0.000127
AFFX-BioC-5_at
677.2
P
0.000081
AFFX-BioC-3_at
398.9
P
0.000127
AFFX-BioDn-5_at
645.9
P
0.002023
AFFX-BioDn-3_at
2699.3
P
0.000127
AFFX-CreX-5_at
7144
P
0.000044
AFFX-CreX-3_at
8367.7
P
0.000044
AFFX-DapX-5_at
14
A
0.340661
AFFX-DapX-M_at
40.8
A
0.147939
AFFX-DapX-3_at
3.6
A
0.868639
AFFX-LysX-5_at
3.3
A
0.659339
AFFX-LysX-M_at
2.8
A
0.772364
AFFX-LysX-3_at
10.3
A
0.425962
AFFX-PheX-5_at
3
A
0.978098
AFFX-PheX-M_at
1.5
A
0.945787
AFFX-PheX-3_at
17.9
A
0.470241
AFFX-ThrX-5_at
4.6
A
0.99238
AFFX-ThrX-M_at
6.4
A
0.5
15333 406 Kbytes .Supplementary file Size Download File type/resource GSM12804.CEL.gz
2.6 Mb
(ftp) (http) CEL
