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Status
Public on Mar 16, 2004
Title
laminin non-binding germ cells GPL341
Sample type
RNA
Source name
germ cells from 22 day old rat testis, cultured
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
50 ng total RNA were amplified using two rounds of amplification. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 0.582).
Submission date
Nov 10, 2003
Last update date
May 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL341 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
159.3
P
0.003212
AFFX-BioB-M_at
217.6
P
0.000095
AFFX-BioB-3_at
108.1
P
0.00007
AFFX-BioC-5_at
319.4
P
0.00007
AFFX-BioC-3_at
205.4
P
0.00007
AFFX-BioDn-5_at
361.4
P
0.000509
AFFX-BioDn-3_at
1468.4
P
0.00007
AFFX-CreX-5_at
3723.8
P
0.000044
AFFX-CreX-3_at
4635.8
P
0.000044
AFFX-DapX-5_at
15.8
P
0.046482
AFFX-DapX-M_at
6.7
A
0.382599
AFFX-DapX-3_at
11.9
A
0.645547
AFFX-LysX-5_at
6.5
A
0.327079
AFFX-LysX-M_at
2.7
A
0.712257
AFFX-LysX-3_at
5.5
A
0.41138
AFFX-PheX-5_at
4
A
0.772364
AFFX-PheX-M_at
8.7
A
0.5
AFFX-PheX-3_at
12.1
A
0.455413
AFFX-ThrX-5_at
2.1
A
0.960339
AFFX-ThrX-M_at
4.9
A
0.544587
15923 422 Kbytes .Supplementary file Size Download File type/resource GSM12806.CEL.gz
2.6 Mb
(ftp) (http) CEL
