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Status
Public on Mar 16, 2004
Title
laminin non-binding germ cells GPL342
Sample type
RNA
Source name
germ cells from 22 day old rat testis, cultured
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
50 ng total RNA were amplified using two rounds of amplification. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 2.117).
Submission date
Nov 10, 2003
Last update date
May 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL342 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
505.7
P
0.003212
AFFX-BioB-M_at
666.9
P
0.000095
AFFX-BioB-3_at
303.4
P
0.00011
AFFX-BioC-5_at
1007.2
P
0.00007
AFFX-BioC-3_at
625.6
P
0.00007
AFFX-BioDn-5_at
998.2
P
0.000662
AFFX-BioDn-3_at
3956.5
P
0.00007
AFFX-CreX-5_at
10435.9
P
0.000044
AFFX-CreX-3_at
12065
P
0.000044
AFFX-DapX-5_at
56.1
A
0.095667
AFFX-DapX-M_at
36.1
A
0.368438
AFFX-DapX-3_at
12.9
A
0.904333
AFFX-LysX-5_at
14
A
0.659339
AFFX-LysX-M_at
3.9
A
0.737173
AFFX-LysX-3_at
30.1
A
0.262827
AFFX-PheX-5_at
4.5
A
0.960339
AFFX-PheX-M_at
4.2
A
0.794268
AFFX-PheX-3_at
42.7
A
0.48511
AFFX-ThrX-5_at
4.2
A
0.953518
AFFX-ThrX-M_at
33.9
A
0.52976
15333 406 Kbytes .Supplementary file Size Download File type/resource GSM12807.CEL.gz
2.5 Mb
(ftp) (http) CEL
