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Status
Public on Mar 16, 2004
Title
testis tubular somatic cells GPL342
Sample type
RNA
Source name
22 day old testis, tubular somatic cells
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
50 ng total RNA were amplified using two rounds of amplification. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 3.274).
Submission date
Nov 10, 2003
Last update date
May 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
schultz@cbio.mskcc.org Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL342 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
565.4
P
0.009337
AFFX-BioB-M_at
1036.2
P
0.00007
AFFX-BioB-3_at
427.4
P
0.000095
AFFX-BioC-5_at
1229
P
0.000127
AFFX-BioC-3_at
706.6
P
0.000258
AFFX-BioDn-5_at
1145
P
0.000857
AFFX-BioDn-3_at
5212.4
P
0.00007
AFFX-CreX-5_at
13268.5
P
0.000044
AFFX-CreX-3_at
15157.1
P
0.000044
AFFX-DapX-5_at
36.8
A
0.39692
AFFX-DapX-M_at
71.6
A
0.078002
AFFX-DapX-3_at
7
A
0.814869
AFFX-LysX-5_at
23.4
A
0.672921
AFFX-LysX-M_at
4.1
A
0.932322
AFFX-LysX-3_at
25.2
A
0.645547
AFFX-PheX-5_at
5.2
A
0.978098
AFFX-PheX-M_at
6.7
A
0.834139
AFFX-PheX-3_at
41.8
A
0.440646
AFFX-ThrX-5_at
3.5
A
0.996788
AFFX-ThrX-M_at
19
A
0.5
15333 408 Kbytes .Supplementary file Size Download File type/resource GSM12809.CEL.gz
2.4 Mb
(ftp) (http) CEL
