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Sample GSM128435 Query DataSets for GSM128435
Status Public on Nov 01, 2006
Title W7(W7+Ca) Vs. W7+La(W7-Ca) - replica 3
Sample type RNA
 
Channel 1
Source name Arabidopsis seedlings pretreated with La and treated with W7 (W7-Ca)
Organism Arabidopsis thaliana
Characteristics Twelve-day old Arabidopsis seedlings were pretreated for 10 minutes with 0.35mM LaCl3 and treated with 0.6mM W7 (W7-Ca) for 1 hour
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Arabidopsis seedlings treated with W7 (W7+Ca)
Organism Arabidopsis thaliana
Characteristics Twelve-day old Arabidopsis seedlings were treated with 0.6 mM W7 (W7+Ca) for 1 hour.
Extracted molecule total RNA
Label Cy3
 
 
Description Total RNA was extracted from seedling treated for one hour as decribed in the channels Characteristics. Hybridization was performed on an array from Arabidopsis Keck Resource Lab Array (Yale University) containing 12K Arabidopsis ESTs. Data in this platform contains 3 repetitions of 3 independent biological experiments.
Data processing Per spot and per chip: intensity dependent (lowess) normalization Genespring version GX 7.3.1
 
Submission date Aug 14, 2006
Last update date Nov 01, 2006
Contact name Robert Fluhr
E-mail(s) robert.fluhr@weizmann.ac.il
Phone 972-8-9342175
Organization name Weizmann Institute of Science
Department Plant Sciences
Street address
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platform ID GPL242
Series (1)
GSE5517 Calcium responsiveness in Arabidopsis using calmodulin antagonists

Data table header descriptions
ID_REF
VALUE normalized ratio
Normalized Control normalized control
RAW raw treatment

Data table
ID_REF VALUE Normalized Control RAW
1 1.81 3565.00 6478.00
2 1.27 435.60 554.90
3 1.81 11250.00 20399.00
4 1.39 9292.00 12997.00
5 1.40 198.30 278.60
6 1.08 224.50 243.90
7 .96 145.40 140.20
8 1.19 319.50 380.50
9 1.47 16475.00 24320.00
10 1.07 3744.00 4018.00
11 1.07 2652.00 2846.00
12 .91 671.50 610.90
13 1.28 6322.00 8108.00
14 .85 2172.00 1855.00
15 1.01 2009.00 2029.00
16 1.27 721.50 919.10
17 1.22 508.60 624.70
18 1.22 4724.00 5766.00
19 1.58 1043.00 1656.00
20 .94 1637.00 1546.00

Total number of rows: 11965

Table truncated, full table size 293 Kbytes.




Supplementary file Size Download File type/resource
GSM128435.txt.gz 1.1 Mb (ftp)(http) TXT

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