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Sample GSM1301500 Query DataSets for GSM1301500
Status Public on Jan 07, 2014
Title biopsy_ID: P29-02
Sample type RNA
 
Source name follicular lymphoma
Organism Homo sapiens
Characteristics tissue: Tumor (lymph node)
Extracted molecule total RNA
Extraction protocol total RNA was extracted from fresh frozen whole tissue sections using the Stratagene Absolute RNA Miniprep Kitaccording to manufacturer's guidelines
Label biotin
Label protocol cRNA was produced and labeled with biotin according to the manufacturer's (Affymetrix) guidelines
 
Hybridization protocol cRNA was fragmented and hybridized according to the manufacturer's (Affymetrix) guidelines
Scan protocol GeneChips were scanned using a standard scanning protocol recommended by the manufacturer (Affymetrix)
Description Fresh frozen tumor tissue sample
Data processing Quantile normalization of gene expression data from each individual array was performed using the GCOS/Expression Console
 
Submission date Jan 06, 2014
Last update date Jan 28, 2023
Contact name Marianne Brodtkorb
E-mail(s) maribeide@live.no
Organization name Oslo University Hospital
Department Institute for Cancer Research, The Norwegian Radium Hospital
Lab Department of Immunology
Street address Ullernchausseen 70
City Oslo
ZIP/Postal code 0379
Country Norway
 
Platform ID GPL570
Series (1)
GSE53820 Gene expression data from serial samples of follicular lymphoma (FLSB - follicular lymphoma serial biopsies)

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1007_s_at 7.819504
1053_at 6.82755
117_at 5.21306
121_at 8.214643
1255_g_at 2.979954
1294_at 7.470727
1316_at 6.118353
1320_at 4.549212
1405_i_at 8.392946
1431_at 3.222962
1438_at 5.446385
1487_at 7.138134
1494_f_at 6.788006
1552256_a_at 7.556511
1552257_a_at 7.49545
1552258_at 5.121
1552261_at 3.86201
1552263_at 5.49056
1552264_a_at 7.649236
1552266_at 3.428519

Total number of rows: 54675

Table truncated, full table size 1052 Kbytes.




Supplementary file Size Download File type/resource
GSM1301500_serialFL_L137_03.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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