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Sample GSM1301516 Query DataSets for GSM1301516
Status Public on Jan 07, 2014
Title biopsy_ID: P15-01
Sample type RNA
 
Source name follicular lymphoma
Organism Homo sapiens
Characteristics tissue: Tumor (lymph node)
Extracted molecule total RNA
Extraction protocol total RNA was extracted from fresh frozen whole tissue sections using the Stratagene Absolute RNA Miniprep Kitaccording to manufacturer's guidelines
Label biotin
Label protocol cRNA was produced and labeled with biotin according to the manufacturer's (Affymetrix) guidelines
 
Hybridization protocol cRNA was fragmented and hybridized according to the manufacturer's (Affymetrix) guidelines
Scan protocol GeneChips were scanned using a standard scanning protocol recommended by the manufacturer (Affymetrix)
Description Fresh frozen tumor tissue sample
Data processing Quantile normalization of gene expression data from each individual array was performed using the GCOS/Expression Console
 
Submission date Jan 06, 2014
Last update date Jan 28, 2023
Contact name Marianne Brodtkorb
E-mail(s) maribeide@live.no
Organization name Oslo University Hospital
Department Institute for Cancer Research, The Norwegian Radium Hospital
Lab Department of Immunology
Street address Ullernchausseen 70
City Oslo
ZIP/Postal code 0379
Country Norway
 
Platform ID GPL570
Series (1)
GSE53820 Gene expression data from serial samples of follicular lymphoma (FLSB - follicular lymphoma serial biopsies)

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1007_s_at 7.152395
1053_at 8.418669
117_at 5.206241
121_at 7.498275
1255_g_at 2.822443
1294_at 7.341627
1316_at 4.442254
1320_at 4.61033
1405_i_at 9.671824
1431_at 3.175198
1438_at 4.983567
1487_at 7.310722
1494_f_at 5.765708
1552256_a_at 7.710277
1552257_a_at 7.122868
1552258_at 4.208501
1552261_at 3.867714
1552263_at 7.946855
1552264_a_at 9.12613
1552266_at 3.018921

Total number of rows: 54675

Table truncated, full table size 1051 Kbytes.




Supplementary file Size Download File type/resource
GSM1301516_serialFL_L219_00.CEL.gz 4.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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