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Sample GSM1301539 Query DataSets for GSM1301539
Status Public on Jan 07, 2014
Title biopsy_ID: P08-02
Sample type RNA
 
Source name follicular lymphoma
Organism Homo sapiens
Characteristics tissue: Tumor (lymph node)
Extracted molecule total RNA
Extraction protocol total RNA was extracted from fresh frozen whole tissue sections using the Stratagene Absolute RNA Miniprep Kitaccording to manufacturer's guidelines
Label biotin
Label protocol cRNA was produced and labeled with biotin according to the manufacturer's (Affymetrix) guidelines
 
Hybridization protocol cRNA was fragmented and hybridized according to the manufacturer's (Affymetrix) guidelines
Scan protocol GeneChips were scanned using a standard scanning protocol recommended by the manufacturer (Affymetrix)
Description Fresh frozen tumor tissue sample
Data processing Quantile normalization of gene expression data from each individual array was performed using the GCOS/Expression Console
 
Submission date Jan 06, 2014
Last update date Jan 28, 2023
Contact name Marianne Brodtkorb
E-mail(s) maribeide@live.no
Organization name Oslo University Hospital
Department Institute for Cancer Research, The Norwegian Radium Hospital
Lab Department of Immunology
Street address Ullernchausseen 70
City Oslo
ZIP/Postal code 0379
Country Norway
 
Platform ID GPL570
Series (1)
GSE53820 Gene expression data from serial samples of follicular lymphoma (FLSB - follicular lymphoma serial biopsies)

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1007_s_at 6.930905
1053_at 8.374349
117_at 5.115861
121_at 7.776879
1255_g_at 3.388431
1294_at 7.55359
1316_at 4.390815
1320_at 4.505443
1405_i_at 9.770492
1431_at 3.546515
1438_at 5.406432
1487_at 7.620922
1494_f_at 5.960424
1552256_a_at 8.645608
1552257_a_at 7.777223
1552258_at 3.968197
1552261_at 3.693512
1552263_at 7.682964
1552264_a_at 8.97366
1552266_at 2.944995

Total number of rows: 54675

Table truncated, full table size 1051 Kbytes.




Supplementary file Size Download File type/resource
GSM1301539_serialFL_L339_01.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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