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Sample GSM1303673 Query DataSets for GSM1303673
Status Public on Sep 03, 2014
Title AN17425 BA24
Sample type genomic
 
Source name AN17425
Organism Homo sapiens
Characteristics gender: Male
sample type: cingulate cortex (BA24)
disease state: normal
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from human brain samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was hybridised to Illumina Infinium Human Methylation 450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software
 
Submission date Jan 08, 2014
Last update date Sep 03, 2014
Contact name Evan Elliott
E-mail(s) evanmelliott@gmail.com
Phone 972722644968
Organization name Bar Ilan University
Department Faculty of Medicine
Street address Hanrietta Sold 8
City Safed
State/province Israel
ZIP/Postal code 13215
Country Israel
 
Platform ID GPL13534
Series (1)
GSE53924 DNA methylation analysis of the autistic brain reveals dysregulated biological pathways

Data table header descriptions
ID_REF
VALUE Average Beta
Signal A
Signal B
Detection Pval

Data table
ID_REF VALUE Signal A Signal B Detection Pval
cg00000029 0.36531 2110 1272 0
cg00000108 0.75244 1142 3775 0
cg00000109 0.57956 1192 1781 0
cg00000165 0.14638 3883 683 0
cg00000236 0.64162 1102 2152 0
cg00000289 0.4145 869 686 0
cg00000292 0.50098 3480 3594 0
cg00000321 0.39007 4200 2750 0
cg00000363 0.15164 8437 1526 0
cg00000622 0.05397 12013 691 0
cg00000658 0.63656 2093 3841 0
cg00000714 0.11498 13439 1759 0
cg00000721 0.73269 954 2889 0
cg00000734 0.06262 9376 633 0
cg00000769 0.07448 5169 424 0
cg00000807 0.75934 2072 6853 0
cg00000884 0.64356 1242 2423 0
cg00000905 0.0811 4523 408 0
cg00000924 0.36975 8017 4762 0
cg00000948 0.75428 1595 5203 0

Total number of rows: 485577

Table truncated, full table size 14519 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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