|
| Status |
Public on Jan 06, 2015 |
| Title |
peripheral airway epithelial cells, cancer 32, rep1 |
| Sample type |
RNA |
| |
|
| Source name |
contral-lateral peripheral airway epithelial cells_cancer
|
| Organism |
Homo sapiens |
| Characteristics |
subject id: cancer 32
age: 67
gender: male
case: adenocarcinoma
cell type: contral-lateral peripheral airway epithelial cells
|
| Treatment protocol |
The cytology brush was spun down and the cell pellet was collected and stored at - 80° C until RNA extraction
|
| Growth protocol |
none
|
| Extracted molecule |
total RNA |
| Extraction protocol |
extracted total RNA using Qiagen miRNeasy Mini Kit (Valencia, CA) according to the company protocol
|
| Label |
FAM™
|
| Label protocol |
per manufacturer's protocol
|
| |
|
| Hybridization protocol |
n/a
|
| Scan protocol |
n/a
|
| Description |
JT32
|
| Data processing |
Five hundred ng of total RNA was used. The TaqMan Array was processed with an ABI 7900 HT (Applied Biosystems, Foster City, CA). MiRNA Taqman array data was normalized based on comparative CT representation using the global normalization method
Fold Change worksheet reports cancer/control
|
| |
|
| Submission date |
Jan 30, 2014 |
| Last update date |
Jan 06, 2015 |
| Contact name |
Jun-Chieh James Tsay |
| E-mail(s) |
tsayj01@nyumc.org
|
| Organization name |
NYU Langone Medical Center
|
| Department |
Medicine
|
| Street address |
562 First Ave. NBV 7N27
|
| City |
new york |
| State/province |
NY |
| ZIP/Postal code |
10016 |
| Country |
USA |
| |
|
| Platform ID |
GPL17039 |
| Series (2) |
| GSE54541 |
Field of Cancerization in Peripheral Airway Epithelium: miRNA |
| GSE54543 |
Field of Cancerization in Peripheral Airway Epithelium |
|
