|
Status |
Public on May 14, 2015 |
Title |
C3H_NAIVE_1 |
Sample type |
RNA |
|
|
Source name |
C3H NAIVE replicate 1
|
Organism |
Mus musculus |
Characteristics |
strain: C3H treatment: NAIVE tissue: dorsal root ganglion
|
Treatment protocol |
Total RNA was extracted from naïve and injured DRGs (6 DRGs per sample, 3 mice) across 9 strains and assessed with the Agilent Bioanalyzer (Agilent Technologies). Four biologically distinct replicates were run per sample for a total of 72 arrays.
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared with Illumina kit for Illumina arrays
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
C3H NAIVE replicate 1
|
Data processing |
The data were log2 transformed and normalised using quantile normalisation in R
|
|
|
Submission date |
Feb 27, 2014 |
Last update date |
May 14, 2015 |
Contact name |
Giovanni Coppola |
E-mail(s) |
gcoppola@ucla.edu
|
Phone |
310-794-4172
|
Organization name |
UCLA
|
Department |
Psychiatry and Neurology
|
Lab |
Neurogenetics
|
Street address |
1524 Gonda, 695 Charles Young Drive South
|
City |
Los Angeles |
State/province |
CA |
ZIP/Postal code |
90095 |
Country |
USA |
|
|
Platform ID |
GPL6885 |
Series (1) |
GSE55424 |
Regeneration occurs in the CNS of CAST/Ei mice as a consequence of enhanced Activin signaling |
|