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Sample GSM135194 Query DataSets for GSM135194
Status Public on Jan 01, 2008
Title Female BALB/c Lacrimal Estrogen, biological rep 1
Sample type RNA
 
Source name Lacrimal glands from estrogen treated female BALB/c mice (glands pooled from 5-8 mice)
Organism Mus musculus
Characteristics Female BALB/c Lacrimal Estrogen, biological rep 1
Extracted molecule total RNA
Extraction protocol RNA was purified with Trizol and RNAqueous spin columns following the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Codelink protocol from 2 microg total RNA using a CodeLink Expression Assay Reagent Kit
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 18 hr at 37C on GE Healthcare/Amersham Biosciences CodeLink UniSet Mouse I Bioarray. Bioarrays were washed and stained with streptavidin-Alexa 647 and washed again.
Scan protocol Bioarrays were scanned with a ScanArray Express HT scanner using ScanArray Express software.
Description Lacrimal gland gene expression from ovarectomized mice treated with estrogen for 14 days.
Data processing Data were analyzed with the CodeLink Image Analysis software using the default settings and normalized using global scaling to a median target intensity on each array of 1.0.
 
Submission date Sep 07, 2006
Last update date Aug 27, 2007
Contact name David A Sullivan
E-mail(s) david.sullivan@schepens.harvard.edu
Phone (617) 912-0287
Fax (617) 912-0101
Organization name Schepens Eye Research Institute
Lab David Sullivan
Street address 20 Staniford Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platform ID GPL4277
Series (1)
GSE5783 Estrogen's and progesterone's impact on gene expression in the mouse lacrimal and meibomoan gland.

Data table header descriptions
ID_REF
VALUE

Data table
ID_REF VALUE
AA015085 1.713210361
AA015403 148.3170675
AA024083 6.549548387
AA032529 0.629508643
AA041973 0.771691011
AA047943 8.921099355
AA060082 8.37923592
AA103180 0.92903062
AA105755 6.545450388
AA116457 1.001606535
AA118546 8.218787481
AA124289 -0.016469307
AA124955 23.23267819
AA170147 11.14622618
AA175619 1.240208895
AA230756 5.146568921
AA240611 1.098627934
AA269839 0.674152715
AA271520 0.911713447
AA388194 0.760119558

Total number of rows: 10012

Table truncated, full table size 209 Kbytes.




Supplementary data files not provided

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