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Sample GSM135198 Query DataSets for GSM135198
Status Public on Jan 01, 2008
Title Female BALB/c Lacrimal Progesterone, biological rep 2
Sample type RNA
 
Source name Lacrimal glands from progesterone treated female BALB/c mice (glands pooled from 5-8 mice)
Organism Mus musculus
Characteristics Female BALB/c Lacrimal Progesterone, biological rep 2
Extracted molecule total RNA
Extraction protocol RNA was purified with Trizol and RNAqueous spin columns following the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Codelink protocol from 2 microg total RNA using a CodeLink Expression Assay Reagent Kit
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 18 hr at 37C on GE Healthcare/Amersham Biosciences CodeLink UniSet Mouse I Bioarray. Bioarrays were washed and stained with streptavidin-Alexa 647 and washed again.
Scan protocol Bioarrays were scanned with a ScanArray Express HT scanner using ScanArray Express software.
Description Lacrimal gland gene expression from ovarectomized mice treated with progesterone for 14 days.
Data processing Data were analyzed with the CodeLink Image Analysis software using the default settings and normalized using global scaling to a median target intensity on each array of 1.0.
 
Submission date Sep 07, 2006
Last update date Aug 27, 2007
Contact name David A Sullivan
E-mail(s) david.sullivan@schepens.harvard.edu
Phone (617) 912-0287
Fax (617) 912-0101
Organization name Schepens Eye Research Institute
Lab David Sullivan
Street address 20 Staniford Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platform ID GPL4277
Series (1)
GSE5783 Estrogen's and progesterone's impact on gene expression in the mouse lacrimal and meibomoan gland.

Data table header descriptions
ID_REF
VALUE

Data table
ID_REF VALUE
AA015085 5.947659074
AA015403 150.7626722
AA024083 7.529969801
AA032529 0.537244167
AA041973 0.801888987
AA047943 8.961818979
AA060082 7.550509835
AA103180 0.956613053
AA105755 1.034168164
AA116457 0.719473556
AA118546 0.563231701
AA124289 0.723018942
AA124955 20.42155555
AA170147 0.927617182
AA175619 1.323227822
AA230756 0.215133522
AA240611 1.375994802
AA269839 0.402301371
AA271520 1.029170467
AA388194 0.505403732

Total number of rows: 10012

Table truncated, full table size 209 Kbytes.




Supplementary data files not provided

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