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Sample GSM135210 Query DataSets for GSM135210
Status Public on Jan 01, 2008
Title Female BALB/c Meibomian Progesterone, biological rep 2
Sample type RNA
 
Source name Lacrimal glands from progesterone treated female BALB/c mice (glands pooled from 5-8 mice)
Organism Mus musculus
Characteristics Female BALB/c Meibomian Progesterone, biological rep 2
Extracted molecule total RNA
Extraction protocol RNA was purified with Trizol and RNAqueous spin columns following the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Codelink protocol from 2 microg total RNA using a CodeLink Expression Assay Reagent Kit
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 18 hr at 37C on GE Healthcare/Amersham Biosciences CodeLink UniSet Mouse I Bioarray. Bioarrays were washed and stained with streptavidin-Alexa 647 and washed again.
Scan protocol Bioarrays were scanned with a ScanArray Express HT scanner using ScanArray Express software.
Description Meibomian gland gene expression from ovarectomized mice treated with progesterone for 14 days.
Data processing Data were analyzed with the CodeLink Image Analysis software using the default settings and normalized using global scaling to a median target intensity on each array of 1.0.
 
Submission date Sep 07, 2006
Last update date Aug 27, 2007
Contact name David A Sullivan
E-mail(s) david.sullivan@schepens.harvard.edu
Phone (617) 912-0287
Fax (617) 912-0101
Organization name Schepens Eye Research Institute
Lab David Sullivan
Street address 20 Staniford Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platform ID GPL4277
Series (1)
GSE5783 Estrogen's and progesterone's impact on gene expression in the mouse lacrimal and meibomoan gland.

Data table header descriptions
ID_REF
VALUE

Data table
ID_REF VALUE
AA015085 8.175431848
AA015403 92.49652536
AA024083 1.415789735
AA032529 7.959706642
AA041973 0.11024521
AA047943 4.790305768
AA060082 7.006663854
AA103180 0.051013962
AA105755 9.659423707
AA116457 1.729747841
AA118546 40.4272126
AA124289 0.569058374
AA124955 43.61540753
AA170147 10.93215775
AA175619 1.466438747
AA230756 2.760926487
AA240611 0.741828403
AA269839 0.012065671
AA271520 0.084036533
AA388194 1.403851881

Total number of rows: 10012

Table truncated, full table size 209 Kbytes.




Supplementary data files not provided

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