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Sample GSM135214 Query DataSets for GSM135214
Status Public on Jan 01, 2008
Title Female BALB/c Meibomian Estrogen+Progesterone, biological rep 3
Sample type RNA
 
Source name Meibomian glands from estrogen treated female BALB/c mice (glands pooled from 5-8 mice)
Organism Mus musculus
Characteristics Female BALB/c Meibomian Estrogen+Progesterone, biological rep 3
Extracted molecule total RNA
Extraction protocol RNA was purified with Trizol and RNAqueous spin columns following the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Codelink protocol from 2 microg total RNA using a CodeLink Expression Assay Reagent Kit
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 18 hr at 37C on GE Healthcare/Amersham Biosciences CodeLink UniSet Mouse I Bioarray. Bioarrays were washed and stained with streptavidin-Alexa 647 and washed again.
Scan protocol Bioarrays were scanned with a ScanArray Express HT scanner using ScanArray Express software.
Description Meibomian gland gene expression from ovarectomized mice treated with estrogen+progesterone for 14 days.
Data processing Data were analyzed with the CodeLink Image Analysis software using the default settings and normalized using global scaling to a median target intensity on each array of 1.0.
 
Submission date Sep 07, 2006
Last update date Aug 27, 2007
Contact name David A Sullivan
E-mail(s) david.sullivan@schepens.harvard.edu
Phone (617) 912-0287
Fax (617) 912-0101
Organization name Schepens Eye Research Institute
Lab David Sullivan
Street address 20 Staniford Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platform ID GPL4277
Series (1)
GSE5783 Estrogen's and progesterone's impact on gene expression in the mouse lacrimal and meibomoan gland.

Data table header descriptions
ID_REF
VALUE

Data table
ID_REF VALUE
AA015085 3.389177286
AA015403 106.1033799
AA024083 1.407389283
AA032529 11.74881463
AA041973 0.026699687
AA047943 4.902128701
AA060082 6.951163544
AA103180 0.071102176
AA105755 17.66442709
AA116457 2.121294282
AA118546 34.73896799
AA124289 0.433371468
AA124955 36.39792619
AA170147 13.50125315
AA175619 0.725953749
AA230756 3.894682547
AA240611 0.672534536
AA269839 0.034393826
AA271520 0.041970035
AA388194 1.132159319

Total number of rows: 10012

Table truncated, full table size 208 Kbytes.




Supplementary data files not provided

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