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Sample GSM135604 Query DataSets for GSM135604
Status Public on Sep 12, 2006
Title Female BALB/c Lacrimal Testosterone, biological rep 1 (CodeLink)
Sample type RNA
 
Source name Lacrimal glands from testosterone treated female BALB/c mice ( glands pooled from 5-6 mice).
Organism Mus musculus
Characteristics Female BALB/c Lacrimal Testosterone, biological rep 1
Extracted molecule total RNA
Extraction protocol RNA was purified with Trizol and RNAqueous spin columns following the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Codelink protocol from 2 microg total RNA using a CodeLink Expression Assay Reagent Kit
 
Hybridization protocol Following fragmentation, 10 microg of cRNA were hybridized for 18 hr at 37C on a GE Healthcare/Amersham Biosciences CodeLink UniSet Mouse 20K I Bioarray. Bioarrays were washed and stained with streptavidin-Alexa 647 and washed again.
Scan protocol Bioarrays were scanned with a ScanArray Express HT scanner using ScanArray Express software.
Description Lacrimal gland gene expression from ovarectomized mice treated with testosterone for 14 days.
Data processing Data were analyzed with the CodeLink Image Analysis software using the default settings and normalized using global scaling to a median target intensity on each array of 1.0.
 
Submission date Sep 11, 2006
Last update date Sep 18, 2006
Contact name Nathaniel Treister
E-mail(s) ntreister@partners.org
Phone 617-912-0298
Organization name Schepens Eye Research Institute
Department
Lab Sullivan Lab
Street address 20 Staniford Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platform ID GPL4295
Series (1)
GSE3995 Female BALB/c Mouse Testosterone-Treated Submandibular/Lacrimal/Meibomian Glands

Data table header descriptions
ID_REF
VALUE normalized signal intensity
ABS CALL

Data table
ID_REF VALUE ABS CALL
1 0.688290971 L
2 8.617643547 G
3 0.651932196 L
4 1.110537372 G
5 2.379079348 G
6 16.03911592 G
7 0.336620863 L
8 8.52269515 G
9 2.616163867 G
10 12.43450545 G
11 9.529668862 G
12 0.146583263 L
13 3.834514361 G
14 3.081694308 G
15 7.072997057 G
16 6.656620442 G
17 3.290460099 G
18 6.074388105 G
19 6.996998674 G
20 0.177254863 L

Total number of rows: 20287

Table truncated, full table size 382 Kbytes.




Supplementary file Size Download File type/resource
GSM135604.txt.gz 333.7 Kb (ftp)(http) TXT

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