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GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Apr 03, 2007 |
| Title |
SAGE_testis_intact male mice |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
56909 |
| Tag Length |
10 |
| |
|
| Source name |
testis
|
| Organism |
Mus musculus |
| Characteristics |
C57BL/6, male, 12-15 wk
|
| Extracted molecule |
total RNA |
| |
|
| Description |
testis were dissected from C57BL6 intact male mice and pooled together. Total RNA was isolated by Trizol.
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| |
|
| Submission date |
Sep 21, 2006 |
| Last update date |
Nov 19, 2008 |
| Contact name |
Kouamé Ettienne Kouadjo |
| E-mail(s) |
Ettienne.Kouadjo@crchul.ulaval.ca
|
| Organization name |
Laval University
|
| Street address |
2705 Bld Laurier
|
| City |
Québec |
| State/province |
Québec |
| ZIP/Postal code |
G1V 4G2 |
| Country |
Canada |
| |
|
| Platform ID |
GPL11 |
| Series (1) |
| GSE5915 |
Characterization of the mouse transcriptome by Serial Analysis of Gene Expression |
|
| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| PERCENT |
|
| Data table |
| TAG |
COUNT |
TPM |
PERCENT |
| TCGATGTCTG |
721 |
12669.35 |
1,266 |
| AGGACATCAG |
374 |
6571.90 |
0,657 |
| GTGGCTCACA |
351 |
6167.74 |
0,616 |
| AAACAGAGTC |
233 |
4094.26 |
0,409 |
| CCTTTAATCC |
162 |
2846.65 |
0,284 |
| GTGCCAGGAG |
140 |
2460.07 |
0,246 |
| GGTCTGGCTG |
140 |
2460.07 |
0,246 |
| GCTCCACTGG |
132 |
2319.49 |
0,231 |
| ACCGCTGAGG |
128 |
2249.20 |
0,224 |
| TGGTTGCTGG |
125 |
2196.49 |
0,219 |
| TGCAACTGGC |
115 |
2020.77 |
0,202 |
| TTCCATCTCT |
108 |
1897.77 |
0,189 |
| TTTAGCCGAG |
105 |
1845.05 |
0,184 |
| CTCTTCCCCC |
105 |
1845.05 |
0,184 |
| TACACGAGGA |
102 |
1792.34 |
0,179 |
| TGCCGTTTTG |
100 |
1757.19 |
0,175 |
| AAGGTCTGCC |
88 |
1546.33 |
0,154 |
| CTCGAGTCTC |
86 |
1511.18 |
0,151 |
| CCGACTGGGG |
85 |
1493.61 |
0,149 |
| GCGTGCTCAG |
84 |
1476.04 |
0,147 |
Total number of rows: 27387
Table truncated, full table size 670 Kbytes.
| Supplementary data files not provided |
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