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Sample GSM1375902 Query DataSets for GSM1375902
Status Public on Jul 01, 2014
Title MPNST_PD901_1
Sample type RNA
 
Source name NPcis Mouse MPNST_PD-0325901
Organism Mus musculus
Characteristics tissue: Primary mouse mouse malignant peripheral nerve sheath tumor (MPNST)
genetic model: NPcis
Treatment protocol 14h with vehicle, or 5mg/kg Rapamycin IP, or 1.5mg/kg PD-0325901 OG twice daily, or combination of 5mg/kg rapamycin IP and 1.5mg/kg PD-0325901 OG twice daily
Extracted molecule total RNA
Extraction protocol Trizol followed by RNeasy cleanup
Label biotin
Label protocol Nugen Applause WT-amp ST kit
 
Hybridization protocol Not provided
Scan protocol Not provided
Description Gene expression data from PD-0325901 treated tumor
Data processing BRB array tools
 
Submission date Apr 28, 2014
Last update date Jul 01, 2014
Contact name Clare Malone
Organization name Harvard Medical School - Brigham Women's Hospital
Department Genetics
Lab Cichowski Lab
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL6246
Series (1)
GSE57141 Defining key signaling nodes and therapeutic biomarkers in NF1-mutant cancers

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
10338001 11.76338959
10338003 10.24650383
10338004 9.071434021
10338017 12.30562878
10338025 8.616542816
10338026 12.5213089
10338029 9.4447155
10338035 9.134479523
10338036 8.889229774
10338037 5.376710415
10338041 10.51323128
10338042 9.808202744
10338044 11.58799648
10338047 7.500505447
10338056 5.073439598
10338059 12.97721386
10338060 5.112814426
10338063
10338064 6.244831085
10338065 7.581935406

Total number of rows: 35512

Table truncated, full table size 724 Kbytes.




Supplementary file Size Download File type/resource
GSM1375902_9a_1844L.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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