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Sample GSM137710 Query DataSets for GSM137710
Status Public on Feb 20, 2007
Title 2000804T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 5174.53
SNP_A-1716667 10251.8
SNP_A-1712945 10833.9
SNP_A-1711654 8816.97
SNP_A-1717655 3946.27
SNP_A-1659842 9394.88
SNP_A-1653742 1007.62
SNP_A-1686138 826.69
SNP_A-1696456 2872.85
SNP_A-1706789 1632.14
SNP_A-1702159 21296.1
SNP_A-1717099 1312.17
SNP_A-1692956 453.354
SNP_A-1693565 1128.05
SNP_A-1731109 19128.3
SNP_A-1642331 13455.6
SNP_A-1713287 11981
SNP_A-1749711 31853.8
SNP_A-1755148 11204.6
SNP_A-1741069 4318.55

Total number of rows: 58960

Table truncated, full table size 1259 Kbytes.




Supplementary data files not provided

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