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Sample GSM137711 Query DataSets for GSM137711
Status Public on Feb 20, 2007
Title 20020041T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 7864.28
SNP_A-1716667 8315.54
SNP_A-1712945 8157.59
SNP_A-1711654 16061.1
SNP_A-1717655 4536.49
SNP_A-1659842 5377.01
SNP_A-1653742 832.875
SNP_A-1686138 590.228
SNP_A-1696456 2953.93
SNP_A-1706789 2877.98
SNP_A-1702159 13991.7
SNP_A-1717099 2033.97
SNP_A-1692956 865.939
SNP_A-1693565 704.451
SNP_A-1731109 12685.6
SNP_A-1642331 10751.7
SNP_A-1713287 4093.71
SNP_A-1749711 35486.3
SNP_A-1755148 7639.02
SNP_A-1741069 5151.15

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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