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Sample GSM137712 Query DataSets for GSM137712
Status Public on Feb 20, 2007
Title 20020051T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 7556.14
SNP_A-1716667 7404.79
SNP_A-1712945 8082.91
SNP_A-1711654 13366.2
SNP_A-1717655 4689.74
SNP_A-1659842 6071.42
SNP_A-1653742 2730.06
SNP_A-1686138 586.597
SNP_A-1696456 2766.3
SNP_A-1706789 1701.2
SNP_A-1702159 16038.5
SNP_A-1717099 1924.13
SNP_A-1692956 939.762
SNP_A-1693565 2068.86
SNP_A-1731109 9073.33
SNP_A-1642331 9763.14
SNP_A-1713287 5132.19
SNP_A-1749711 31509
SNP_A-1755148 11654.8
SNP_A-1741069 3284.02

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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