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Sample GSM137713 Query DataSets for GSM137713
Status Public on Feb 20, 2007
Title 20020056T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 7194.74
SNP_A-1716667 9412.35
SNP_A-1712945 13131.3
SNP_A-1711654 9671.73
SNP_A-1717655 3908.45
SNP_A-1659842 9480.8
SNP_A-1653742 1422.45
SNP_A-1686138 528.015
SNP_A-1696456 3488.48
SNP_A-1706789 1885.23
SNP_A-1702159 20536.4
SNP_A-1717099 1450
SNP_A-1692956 693.313
SNP_A-1693565 1281.31
SNP_A-1731109 21835.2
SNP_A-1642331 13401.1
SNP_A-1713287 6607.27
SNP_A-1749711 27643.2
SNP_A-1755148 10224.8
SNP_A-1741069 5236.53

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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