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Sample GSM137716 Query DataSets for GSM137716
Status Public on Feb 20, 2007
Title 20020160T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 8357.8
SNP_A-1716667 9617.9
SNP_A-1712945 4586.19
SNP_A-1711654 20798.4
SNP_A-1717655 4216.44
SNP_A-1659842 4108.69
SNP_A-1653742 1997.21
SNP_A-1686138 1248.84
SNP_A-1696456 3362.97
SNP_A-1706789 4403.79
SNP_A-1702159 13504.2
SNP_A-1717099 4689.83
SNP_A-1692956 1230.04
SNP_A-1693565 1960.82
SNP_A-1731109 14185
SNP_A-1642331 7047.74
SNP_A-1713287 3519.08
SNP_A-1749711 25420.6
SNP_A-1755148 8993.57
SNP_A-1741069 2835.95

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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