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Sample GSM137717 Query DataSets for GSM137717
Status Public on Feb 20, 2007
Title 980197T
Sample type genomic
 
Source name Breast Tumor
Organism Homo sapiens
Characteristics Tissue: Breast
Extracted molecule genomic DNA
Extraction protocol Qiagen DNA extraction kit was used according to the manufacturer's instructions.
Label biotinylated dideoxy ATP
Label protocol biotinylated dideoxy ATP is terminal deoxynucleotidyl transferased
 
Hybridization protocol Following Manufactruer's protocol
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner GCS3000
Description SNP profiling for breast tumors
Data processing The data were analyzed Dchip software for normalization and expression estimation
 
Submission date Sep 28, 2006
Last update date Feb 20, 2007
Contact name wei chen
E-mail(s) chenwei@agenica.com
Organization name Agenica Research Pte Ltd
Street address 11 Hospital Drive
City Singapore
ZIP/Postal code 169610
Country Singapore
 
Platform ID GPL2005
Series (1)
GSE5927 SNP expression data from breast cancer

Data table header descriptions
ID_REF
VALUE Dchip generated Signal intensity

Data table
ID_REF VALUE
SNP_A-1650338 4750.96
SNP_A-1716667 7788.6
SNP_A-1712945 4989.44
SNP_A-1711654 14621.4
SNP_A-1717655 6379.9
SNP_A-1659842 3134.23
SNP_A-1653742 3798.71
SNP_A-1686138 5056.69
SNP_A-1696456 732.583
SNP_A-1706789 3785.21
SNP_A-1702159 7230.72
SNP_A-1717099 5710.14
SNP_A-1692956 3093.76
SNP_A-1693565 3149.86
SNP_A-1731109 10925.7
SNP_A-1642331 14161.3
SNP_A-1713287 2054.8
SNP_A-1749711 35414.4
SNP_A-1755148 4851.52
SNP_A-1741069 3835.99

Total number of rows: 58960

Table truncated, full table size 1258 Kbytes.




Supplementary data files not provided

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